Publications

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2024
 

Glucuronan lyases from family PL7 use a Tyr/Tyr syn β-elimination catalytic mechanism for glucuronan breakdown

Vuillemin, Marlene ; Pilgaard, Bo ; Kiehn, Emma ; Fredslund, Folmer ; Welner, Ditte H. ; Meyer, Anne S. ; Aachmann, Finn L. ; Wilkens, Casper
in: Chemical Communications, vol: 60, issue: 4, pages: 440-443

Type: Journal article (Peer reviewed)

Status: Published     |    Year: 2024     |    DOI: https://doi.org/10.1039/d3cc04256a

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“Graphene nanospikes exert bactericidal effect through mechanical damage and oxidative stress”

Chen, Yanyan ; Pandit, Santosh ; Rahimi, Shadi ; Mijakovic, Ivan
in: Carbon, vol: 218

Type: Journal article (Peer reviewed)

Status: Published     |    Year: 2024     |    DOI: https://doi.org/10.1016/j.carbon.2023.118740

 

Harnessing metabolic plasticity in CHO cells for enhanced perfusion cultivation

Nöbel, Matthias ; Barry, Craig ; MacDonald, Michael A. ; Baker, Kym ; Shave, Evan ; Mahler, Stephen ; Munro, Trent ; Martínez, Verónica S. ; Nielsen, Lars K. ; Marcellin, Esteban
in: Biotechnology and Bioengineering

Type: Journal article (Peer reviewed)

Status: Accepted/In press     |    Year: 2024     |    DOI: https://doi.org/10.1002/bit.28613

 

How many Mutations are needed to Evolve the Chemical Makeup of a Synthetic Cell?

Lefèvre-Morand, Rodrigue Yves Louis ; Nikel, Pablo Iván ; Acevedo-Rocha, Carlos G.
in: ChemBioChem

Type: Journal article (Peer reviewed)

Status: Accepted/In press     |    Year: 2024     |    DOI: https://doi.org/10.1002/cbic.202300829

 

Impact of Synergy Partner Cel7B on Cel7A Binding Rates: Insights from Single-Molecule Data

Nousi, Aimilia ; Molina, Gustavo Avelar ; Schiano-di-Cola, Corinna ; Sørensen, Trine Holst ; Borch, Kim ; Pedersen, Jonas N. ; Westh, Peter ; Marie, Rodolphe
in: Journal of Physical Chemistry Part B: Condensed Matter, Materials, Surfaces, Interfaces & Biophysical, vol: 128, issue: 3, pages: 635-647

Type: Journal article (Peer reviewed)

Status: Published     |    Year: 2024     |    DOI: https://doi.org/10.1021/acs.jpcb.3c05697

 

Increased Levels of Inflammatory and Endothelial Biomarkers in Blood of Long COVID Patients Point to Thrombotic Endothelialitis

Turner, Simone ; Naidoo, Caitlin A ; Usher, Thomas J ; Kruger, Arneaux ; Venter, Chantelle ; Laubscher, Gert J ; Khan, M Asad ; Kell, Douglas B ; Pretorius, Etheresia
in: Seminars in Thrombosis and Hemostasis

Type: Journal article (Peer reviewed)

Status: Accepted/In press     |    Year: 2024     |    DOI: https://doi.org/10.1055/s-0043-1769014

 

Inferring secretory and metabolic pathway activity from omic data with secCellFie

Masson, Helen O ; Samoudi, Mojtaba ; Robinson, Caressa M ; Kuo, Chih-Chung ; Weiss, Linus ; Shams Ud Doha, Km ; Campos, Alex ; Tejwani, Vijay ; Dahodwala, Hussain ; Menard, Patrice ; Voldborg, Bjorn G ; Robasky, Bradley ; Sharfstein, Susan T ; Lewis, Nathan E
in: Metabolic Engineering, vol: 81, pages: 273-285

Type: Journal article (Peer reviewed)

Status: Published     |    Year: 2024     |    DOI: https://doi.org/10.1016/j.ymben.2023.12.006

 

Learning by teaching efficiently enhances learning outcomes in molecular biology of the cell course

Mijakovic, Ivan ; Rahimi, Shadi
in: Biochemistry and Molecular Biology Education

Type: Journal article (Peer reviewed)

Status: Accepted/In press     |    Year: 2024     |    DOI: https://doi.org/10.1002/bmb.21784

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LooplessFluxSampler

Saa, Pedro A. ; Zapararte, Sebastian ; Drovandi, Christopher C. ; Nielsen, Lars K.
in: BMC Bioinformatics, vol: 25, issue: 1

Type: Journal article (Peer reviewed)

Status: Published     |    Year: 2024     |    DOI: https://doi.org/10.1186/s12859-023-05616-2

 

Metabolic engineering of yeast for the production of carbohydrate-derived foods and chemicals from C1–3 molecules

Tang, Hongting ; Wu, Lianghuan ; Guo, Shuyuan ; Cao, Wenbing ; Ma, Wenhui ; Wang, Xiang ; Shen, Junfeng ; Wang, Menglin ; Zhang, Qiannan ; Huang, Mingtao ; Luo, Xiaozhou ; Zeng, Jie ; Keasling, Jay D. ; Yu, Tao
in: Nature Catalysis, vol: 7, pages: 21-34

Type: Journal article (Peer reviewed)

Status: Published     |    Year: 2024     |    DOI: https://doi.org/10.1038/s41929-023-01063-7