Publications

Exploring the microbial diversity of novel misos with metagenomics

Kothe, Caroline Isabel ; Rasmussen, Jacob Agerbo ; Mak, Sarah S.T. ; Gilbert, M. Thomas P. ; Evans, Joshua
in: Food Microbiology, vol: 117

Type: Journal article (Peer reviewed)

Status: Published | Year: 2024 | DOI: https://doi.org/10.1016/j.fm.2023.104372

3D printed inserts for reproducible high throughput screening of cell migration

Joshi, Abhayraj S. ; Madhusudanan, Mukil ; Mijakovic, Ivan
in: Frontiers in Cell and Developmental Biology, vol: 11

Type: Journal article (Peer reviewed)

Status: Published | Year: 2023 | DOI: https://doi.org/10.3389/fcell.2023.1256250

Accelerating discovery

Turner, Simone ; Laubscher, Gert Jacobus ; Khan, M. Asad ; Kell, Douglas B. ; Pretorius, Etheresia
in: Heliyon, vol: 9, issue: 9

Type: Journal article (Peer reviewed)

Status: Published | Year: 2023 | DOI: https://doi.org/10.1016/j.heliyon.2023.e19605

A comprehensive and systemic review of ginseng-based nanomaterials

Balusamy, Sri Renukadevi ; Perumalsamy, Haribalan ; Huq, Md Amdadul ; Yoon, Tae Hyun ; Mijakovic, Ivan ; Thangavelu, Lakshmi ; Yang, Deok Chun ; Rahimi, Shadi
in: Medicinal Research Reviews, vol: 43, issue: 5

Type: Review (Peer reviewed)

Status: Published | Year: 2023 | DOI: https://doi.org/10.1002/med.21953

Adaptive evolution of a minimal organism with a synthetic genome

Sandberg, Troy E. ; Wise, Kim S. ; Dalldorf, Christopher ; Szubin, Richard ; Feist, Adam M. ; Glass, John I. ; Palsson, Bernhard O.
in: iScience, vol: 26, issue: 9

Type: Journal article (Peer reviewed)

Status: Published | Year: 2023 | DOI: https://doi.org/10.1016/j.isci.2023.107500

Adaptive laboratory evolution of Bacillus subtilis to overcome toxicity of lignocellulosic hydrolysate derived from Distiller's dried grains with solubles (DDGS)

Driessen, Jasper L.S.P. ; Johnsen, Josefin ; Pogrebnyakov, Ivan ; Mohamed, Elsayed T.T. ; Mussatto, Solange I. ; Feist, Adam M. ; Jensen, Sheila I. ; Nielsen, Alex T.
in: Metabolic Engineering Communications, vol: 16

Type: Journal article (Peer reviewed)

Status: Published | Year: 2023 | DOI: https://doi.org/10.1016/j.mec.2023.e00223

Adaptive laboratory evolution reveals general and specific chemical tolerance mechanisms and enhances biochemical production

Lennen, Rebecca M. ; Jensen, Kristian ; Mohammed, Elsayed T. ; Malla, Sailesh ; Börner, Rosa A. ; Chekina, Ksenia ; Özdemir, Emre ; Bonde, Ida ; Koza, Anna ; Maury, Jérôme ; Pedersen, Lasse E. ; Schöning, Lars Y. ; Sonnenschein, Nikolaus ; Palsson, Bernhard O. ; Sommer, Morten O. A. ; Feist, Adam M. ; Nielsen, Alex T. ; Herrgård, Markus J.
in: bioRxiv

Type: Journal article

Status: Submitted | Year: 2023 | DOI: https://doi.org/10.1101/634105

Adaptive laboratory evolution to hypersaline conditions, of lactic acid bacteria isolated from seaweed

Papadopoulou, Eleftheria ; Rodriguez de Evgrafov, Mari Cristina ; Kalea, Argyro ; Tsapekos, Panagiotis ; Angelidaki, Irini
in: New Biotechnology

Type: Journal article (Peer reviewed)

Status: Published | Year: 2023 | DOI: https://doi.org/10.1016/j.nbt.2023.03.001

A draft human pangenome reference

Liao, Wen Wei ; Asri, Mobin ; Ebler, Jana ; Doerr, Daniel ; Haukness, Marina ; Hickey, Glenn ; Lu, Shuangjia ; Lucas, Julian K. ; Monlong, Jean ; Abel, Haley J. ; Buonaiuto, Silvia ; Chang, Xian H. ; Cheng, Haoyu ; Chu, Justin ; Colonna, Vincenza ; Eizenga, Jordan M. ; Feng, Xiaowen ; Fischer, Christian ; Fulton, Robert S. ; Garg, Shilpa ; Groza, Cristian ; Guarracino, Andrea ; Harvey, William T. ; Heumos, Simon ; Howe, Kerstin ; Jain, Miten ; Lu, Tsung Yu ; Markello, Charles ; Martin, Fergal J. ; Mitchell, Matthew W. ; Munson, Katherine M. ; Mwaniki, Moses Njagi ; Novak, Adam M. ; Olsen, Hugh E. ; Pesout, Trevor ; Porubsky, David ; Prins, Pjotr ; Sibbesen, Jonas A. ; Sirén, Jouni ; Tomlinson, Chad ; Villani, Flavia ; Vollger, Mitchell R. ; Antonacci-Fulton, Lucinda L. ; Baid, Gunjan ; Baker, Carl A. ; Belyaeva, Anastasiya ; Billis, Konstantinos ; Carroll, Andrew ; Chang, Pi Chuan ; Cody, Sarah ; Cook, Daniel E. ; Cook-Deegan, Robert M. ; Cornejo, Omar E. ; Diekhans, Mark ; Ebert, Peter ; Fairley, Susan ; Fedrigo, Olivier ; Felsenfeld, Adam L. ; Formenti, Giulio ; Frankish, Adam ; Gao, Yan ; Garrison, Nanibaa’ A. ; Giron, Carlos Garcia ; Green, Richard E. ; Haggerty, Leanne ; Hoekzema, Kendra ; Hourlier, Thibaut ; Ji, Hanlee P. ; Kenny, Eimear E. ; Koenig, Barbara A. ; Kolesnikov, Alexey ; Korbel, Jan O. ; Kordosky, Jennifer ; Koren, Sergey ; Lee, Ho Joon ; Lewis, Alexandra P. ; Magalhães, Hugo ; Marco-Sola, Santiago ; Marijon, Pierre ; McCartney, Ann ; McDaniel, Jennifer ; Mountcastle, Jacquelyn ; Nattestad, Maria ; Nurk, Sergey ; Olson, Nathan D. ; Popejoy, Alice B. ; Puiu, Daniela ; Rautiainen, Mikko ; Regier, Allison A. ; Rhie, Arang ; Sacco, Samuel ; Sanders, Ashley D. ; Schneider, Valerie A. ; Schultz, Baergen I. ; Shafin, Kishwar ; Smith, Michael W. ; Sofia, Heidi J. ; Abou Tayoun, Ahmad N. ; Thibaud-Nissen, Françoise ; Tricomi, Francesca Floriana ; Wagner, Justin ; Walenz, Brian ; Wood, Jonathan M.D. ; Zimin, Aleksey V. ; Bourque, Guillaume ; Chaisson, Mark J.P. ; Flicek, Paul ; Phillippy, Adam M. ; Zook, Justin M. ; Eichler, Evan E. ; Haussler, David ; Wang, Ting ; Jarvis, Erich D. ; Miga, Karen H. ; Garrison, Erik ; Marschall, Tobias ; Hall, Ira M. ; Li, Heng ; Paten, Benedict
in: Nature, vol: 617, issue: 7960, pages: 312-324

Type: Journal article (Peer reviewed)

Status: Published | Year: 2023 | DOI: https://doi.org/10.1038/s41586-023-05896-x