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2024
 

Commensal production of a broad-spectrum and short-lived antimicrobial peptide polyene eliminates nasal Staphylococcus aureus

Torres Salazar, Benjamin O. ; Dema, Taulant ; Schilling, Nadine A. ; Janek, Daniela ; Bornikoel, Jan ; Berscheid, Anne ; Elsherbini, Ahmed M.A. ; Krauss, Sophia ; Jaag, Simon J. ; Lämmerhofer, Michael ; Li, Min ; Alqahtani, Norah ; Horsburgh, Malcolm J. ; Weber, Tilmann ; Beltrán-Beleña, José Manuel ; Brötz-Oesterhelt, Heike ; Grond, Stephanie ; Krismer, Bernhard ; Peschel, Andreas
in: Nature Microbiology, vol: 9, issue: 1, pages: 200-213

Type: Journal article (Peer reviewed)

Status: Published     |    Year: 2024     |    DOI: https://doi.org/10.1038/s41564-023-01544-2

 

Dilarmycins A-C, Calcium-Dependent Lipopeptide Antibiotics with a Non-canonical Ca(2+)-Binding Motif

Fernández-Pastor, Ignacio ; Ortiz-López, Francisco Javier ; Oves-Costales, Daniel ; Martín, Jesús ; Sánchez, Pilar ; Melguizo, Ángeles ; Reyes Gonzalez, Fernando ; Weber, Tilmann ; Genilloud, Olga
in: Organic Letters, vol: 26, issue: 7, pages: 1343–1347

Type: Journal article (Peer reviewed)

Status: Published     |    Year: 2024     |    DOI: https://doi.org/10.1021/acs.orglett.3c04195

 

Genome-Driven Discovery of Hygrocins in Streptomyces rapamycinicus

Mahmoud Mohamed, Manar Magdy ; Yang, Zhijie ; Lum, Kah Yean ; Peschel, Gundela ; Rosenbaum, Miriam A. ; Weber, Tilmann ; Coriani, Sonia ; Gotfredsen, Charlotte H. ; Ding, Ling
in: Journal of Natural Products

Type: Journal article (Peer reviewed)

Status: Accepted/In press     |    Year: 2024     |    DOI: https://doi.org/10.1021/acs.jnatprod.3c00767

 

Pepticinnamins N, O, and P, Nonribosomal Peptides from the Soil-Derived Streptomyces mirabilis P8-A2

Mohamed, Manar Magdy Mahmoud ; Abboud, Maria Mahmoud ; Maleckis, Matiss ; Souza, Luciano D. O. ; Moreira, José M. A. ; Gotfredsen, Charlotte H. ; Weber, Tilmann ; Ding, Ling
in: Journal of Natural Products, vol: 87, issue: 4, pages: 1075-1083

Type: Journal article (Peer reviewed)

Status: Published     |    Year: 2024     |    DOI: https://doi.org/10.1021/acs.jnatprod.4c00029

 

teemi: An open-source literate programming approach for iterative design-build-test-learn cycles in bioengineering

Petersen, Søren D. ; Levassor, Lucas ; Pedersen, Christine M. ; Madsen, Jan ; Hansen, Lea G. ; Zhang, Jie ; Haidar, Ahmad K. ; Frandsen, Rasmus J. N. ; Keasling, Jay D. ; Weber, Tilmann ; Sonnenschein, Nikolaus ; K. Jensen, Michael
in: PLOS Computational Biology, vol: 20, issue: 3

Type: Journal article (Peer reviewed)

Status: Published     |    Year: 2024     |    DOI: https://doi.org/10.1371/journal.pcbi.1011929

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The antiSMASH database version 4: additional genomes and BGCs, new sequence-based searches and more

Blin, Kai ; Shaw, Simon ; Medema, Marnix H. ; Weber, Tilmann
in: Nucleic Acids Research, vol: 52, issue: D1, pages: D586–D589

Type: Journal article (Peer reviewed)

Status: Published     |    Year: 2024     |    DOI: https://doi.org/10.1093/nar/gkad984

2023
  PDF

1000+ New Complete Genomes Aid Discovery Of Natural Products

Jørgensen, Tue Sparholt ; Mohite, Omkar Satyavan ; Sterndorff, Eva Baggesgaard ; Arévalo, María Álvarez ; Blin, Kai ; Booth, Thomas ; Charusanti, Pep ; Faurdal, David Lokjær ; Hansen, Troels Østergaard ; Mourched, Anna-Sophie ; Phaneuf, Patrick Victor ; Palsson, Bernhard ; Weber, Tilmann
part of: The Danish Microbiological Society Annual Congress 2023, pages: 82-82, 2023
Presented at:
The Danish Microbiological Society Annual Congress 2023

Type: Conference abstract in proceedings (Peer reviewed)

Status: Published     |    Year: 2023

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antiSMASH 7.0

Blin, Kai ; Shaw, Simon ; Augustijn, Hannah E ; Reitz, Zachary L ; Biermann, Friederike ; Alanjary, Mohammad ; Fetter, Artem ; Terlouw, Barbara R ; Metcalf, William W ; Helfrich, Eric J N ; van Wezel, Gilles P ; Medema, Marnix H ; Weber, Tilmann
in: Nucleic Acids Research, vol: 51, pages: 5

Type: Journal article (Peer reviewed)

Status: Published     |    Year: 2023     |    DOI: https://doi.org/10.1093/nar/gkad344