All publications Bacterial Cell Factory Optimization

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ALL ARTICLE (59) DISSERTATION (0) BOOK (3) CONF (16) REPORT (0) MISC (0) PATENT (17) PEER REV (86)
2024
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Adaptive laboratory evolution reveals general and specific chemical tolerance mechanisms and enhances biochemical production

Lennen, Rebecca M. ; Jensen, Kristian ; Mohammed, Elsayed T. ; Malla, Sailesh ; Börner, Rosa A. ; Chekina, Ksenia ; Özdemir, Emre ; Bonde, Ida ; Koza, Anna ; Maury, Jérôme ; Pedersen, Lasse E. ; Schöning, Lars Y. ; Sonnenschein, Nikolaus ; Palsson, Bernhard O. ; Sommer, Morten O. A. ; Feist, Adam M. ; Nielsen, Alex T. ; Herrgård, Markus J.
in: bioRxiv

Type: Journal article

Status: Submitted     |    Year: 2024     |    DOI: https://doi.org/10.1101/634105

 

Impact of Synergy Partner Cel7B on Cel7A Binding Rates: Insights from Single-Molecule Data

Nousi, Aimilia ; Molina, Gustavo Avelar ; Schiano-di-Cola, Corinna ; Sørensen, Trine Holst ; Borch, Kim ; Pedersen, Jonas N. ; Westh, Peter ; Marie, Rodolphe
in: Journal of Physical Chemistry Part B: Condensed Matter, Materials, Surfaces, Interfaces & Biophysical, vol: 128, issue: 3, pages: 635-647

Type: Journal article (Peer reviewed)

Status: Published     |    Year: 2024     |    DOI: https://doi.org/10.1021/acs.jpcb.3c05697

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Probing efficient microbial CO2 utilisation through metabolic and process modelling

Gorter de Vries, Philip J. ; Mol, Viviënne ; Sonnenschein, Nikolaus ; Jensen, Torbjørn Ølshøj ; Nielsen, Alex Toftgaard
in: Microbial Biotechnology, vol: 17, issue: 2

Type: Journal article (Peer reviewed)

Status: Published     |    Year: 2024     |    DOI: https://doi.org/10.1111/1751-7915.14414

2023
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A Broad-Host-Range Expression Platform To Facilitate Chassis Screening

Mol, Viviënne ; De Almeida Will, Ácil ; Falkenberg, Kristoffer Bach ; Pogrebnyakov, Ivan ; Beck, Charlotte ; Skøttrup, Anna Lyhne ; Nielsen, Alex Toftgaard ; Ingemann Jensen, Sheila
part of: The Danish Microbiological Society Annual Congress 2023, pages: 85-85, 2023
Presented at: The Danish Microbiological Society Annual Congress 2023

Type: Conference abstract in proceedings (Peer reviewed)

Status: Published     |    Year: 2023

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Adaptive laboratory evolution of Bacillus subtilis to overcome toxicity of lignocellulosic hydrolysate derived from Distiller's dried grains with solubles (DDGS)

Driessen, Jasper L.S.P. ; Johnsen, Josefin ; Pogrebnyakov, Ivan ; Mohamed, Elsayed T.T. ; Mussatto, Solange I. ; Feist, Adam M. ; Jensen, Sheila I. ; Nielsen, Alex T.
in: Metabolic Engineering Communications, vol: 16

Type: Journal article (Peer reviewed)

Status: Published     |    Year: 2023     |    DOI: https://doi.org/10.1016/j.mec.2023.e00223

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An improved integrative GFP-based vector for genetic engineering of Parageobacillus thermoglucosidasius facilitates the identification of a key sporulation regulator

Millgaard, Marie ; Bidart, Gonzalo Nahuel ; Pogrebnyakov, Ivan ; Nielsen, Alex Toftgaard ; Welner, Ditte Hededam
in: AMB Express, vol: 13, issue: 1

Type: Journal article (Peer reviewed)

Status: Published     |    Year: 2023     |    DOI: https://doi.org/10.1186/s13568-023-01544-9

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Characterization of tyrosine ammonia lyases from Flavobacterium johnsonian and Herpetosiphon aurantiacus

Virklund, Alexander ; Jendresen, Christian Bille ; Nielsen, Alex Toftgaard ; Woodley, John M
in: Biotechnology Journal, vol: 18, issue: 11

Type: Journal article (Peer reviewed)

Status: Published     |    Year: 2023     |    DOI: https://doi.org/10.1002/biot.202300111

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Combining genetic engineering and bioprocess concepts for improved phenylpropanoid production

Virklund, Alexander ; Jensen, Sheila I. ; Nielsen, Alex T. ; Woodley, John M.
in: Biotechnology and Bioengineering, vol: 120, issue: 3, pages: 613-628

Type: Journal article (Peer reviewed)

Status: Published     |    Year: 2023     |    DOI: https://doi.org/10.1002/bit.28292

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Domestication Of Pantoea Sp. Through Genome-Scale Metabolic Modelling And A Genetic Toolbox

van der Heijden, Lies ; van der Maas, Lucas Nicolaas Ludovic ; Gorter de Vries, Philip Johannes ; Özdemir, Emre ; Ingemann Jensen, Sheila
part of: The Danish Microbiological Society Annual Congress 2023, pages: 60-60, 2023
Presented at: The Danish Microbiological Society Annual Congress 2023

Type: Conference abstract in proceedings (Peer reviewed)

Status: Published     |    Year: 2023

 

Folding of heterologous proteins in bacterial cell factories: Cellular mechanisms and engineering strategies

Rong, Yixin ; Jensen, Sheila Ingemann ; Lindorff-Larsen, Kresten ; Nielsen, Alex Toftgaard
in: Biotechnology Advances, vol: 63

Type: Journal article (Peer reviewed)

Status: Published     |    Year: 2023     |    DOI: https://doi.org/10.1016/j.biotechadv.2022.108079