Kai Blin

Kai Blin

Postdoc

DTU BIOSUSTAIN
Novo Nordisk Foundation Center for Biosustainability

Technical University of Denmark

Kemitorvet

Building 220, room 326F

2800 Kgs.Lyngby

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2017
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The antiSMASH database, a comprehensive database of microbial secondary metabolite biosynthetic gene clusters

Blin, Kai ; Medema, Marnix H. ; Kottmann, Renzo ; Lee, Sang Yup ; Weber, Tilmann
in journal: Nucleic Acids Research (ISSN: 0305-1048) (DOI: http://dx.doi.org/10.1093/nar/gkw960), vol: 45, issue: D1, pages: D555-D559, 2017

Type: Journal article (Peer reviewed)

Status: Published     |    Year: 2017     |    DOI: http://dx.doi.org/10.1093/nar/gkw960

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Designing sgRNAs with CRISPy web

Blin, Kai ; Lee, Sang Yup ; Weber, Tilmann
in journal: Lab Times (ISSN: 1864-2381), issue: 1, pages: 53, 2017

Type: Journal article

Status: Published     |    Year: 2017

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plantiSMASH: automated identification, annotation and expression analysis of plant biosynthetic gene clusters

Kautsar, Satria A. ; Suarez Duran, Hernando G. ; Blin, Kai ; Osbourn, Anne ; Medema, Marnix H.
in journal: Nucleic Acids Research (ISSN: 0305-1048) (DOI: http://dx.doi.org/10.1093/nar/gkx305), vol: 45, issue: W1, pages: W55-W63, 2017

Type: Journal article (Peer reviewed)

Status: Published     |    Year: 2017     |    DOI: http://dx.doi.org/10.1093/nar/gkx305

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The Antibiotic Resistant Target Seeker (ARTS), an exploration engine for antibiotic cluster prioritization and novel drug target discovery

Alanjary, Mohammad ; Kronmiller, Brent ; Adamek, Martina ; Blin, Kai ; Weber, Tilmann ; Huson, Daniel ; Philmus, Benjamin ; Ziemert, Nadine
in journal: Nucleic Acids Research (ISSN: 0305-1048) (DOI: http://dx.doi.org/10.1093/nar/gkx360), vol: 45, pages: W42-W48, 2017

Type: Journal article (Peer reviewed)

Status: E-pub ahead of print     |    Year: 2017     |    DOI: http://dx.doi.org/10.1093/nar/gkx360

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antiSMASH 4.0-improvements in chemistry prediction and gene cluster boundary identification

Blin, Kai ; Wolf, Thomas ; Chevrette, Marc G. ; Lu, Xiaowen ; Schwalen, Christopher J. ; Kautsar, Satria A. ; Suarez Duran, Hernando G. ; de Los Santos, Emmanuel L. C. ; Kim, Hyun Uk ; Nave, Mariana ; Dickschat, Jeroen S. ; Mitchell, Douglas A. ; Shelest, Ekaterina ; Breitling, Rainer ; Takano, Eriko ; Lee, Sang Yup ; Weber, Tilmann ; Medema, Marnix H.
in journal: Nucleic Acids Research (ISSN: 0305-1048) (DOI: http://dx.doi.org/10.1093/nar/gkx319), 2017

Type: Journal article (Peer reviewed)

Status: Accepted/In press     |    Year: 2017     |    DOI: http://dx.doi.org/10.1093/nar/gkx319

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Dissemination of antibiotic resistance genes from antibiotic producers to pathogens

Jiang, Xinglin ; Ellabaan, Mostafa M Hashim ; Charusanti, Pep ; Munck, Christian ; Blin, Kai ; Tong, Yaojun ; Weber, Tilmann ; Sommer, Morten Otto Alexander ; Lee, Sang Yup
in journal: Nature Communications (ISSN: 2041-1723) (DOI: http://dx.doi.org/10.1038/ncomms15784), vol: 8, 2017

Type: Journal article (Peer reviewed)

Status: Published     |    Year: 2017     |    DOI: http://dx.doi.org/10.1038/ncomms15784

2016
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CRISPy-web

Blin, Kai ; Pedersen, Lasse Ebdrup ; Weber, Tilmann ; Lee, Sang Yup
in journal: Synthetic and Systems Biotechnology (ISSN: 2405-805x) (DOI: http://dx.doi.org/10.1016/j.synbio.2016.01.003), vol: 1, issue: 2, pages: 118-121, 2016

Type: Journal article (Peer reviewed)

Status: Published     |    Year: 2016     |    DOI: http://dx.doi.org/10.1016/j.synbio.2016.01.003

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Ten Simple Rules for Taking Advantage of Git and GitHub

Perez-Riverol, Yasset ; Gatto, Laurent ; Wang, Rui ; Sachsenberg, Timo ; Uszkoreit, Julian ; Leprevost, Felipe da Veiga ; Fufezan, Christian ; Ternent, Tobias ; Eglen, Stephen J. ; Katz, Daniel S. ; Pollard, Tom J. ; Konovalov, Alexander ; Flight, Robert M. ; Blin, Kai ; Vizcaíno, Juan Antonio
in journal: P L o S Computational Biology (Online) (ISSN: 1553-7358) (DOI: http://dx.doi.org/10.1371/journal.pcbi.1004947), vol: 12, issue: 7, 2016

Type: Journal article (Peer reviewed)

Status: Published     |    Year: 2016     |    DOI: http://dx.doi.org/10.1371/journal.pcbi.1004947

 

Engineering of actinomycetes using CRISPR/Cas9 technologies

Weber, Tilmann ; Tong, Yaojun ; Blin, Kai ; Lee, Sang Yup
in journal: Planta Medica (ISSN: 0032-0943) (DOI: http://dx.doi.org/10.1055/s-0036-1596147), vol: 81, issue: S01, 2016
Presented at:
9th Joint Meeting of AFERP, ASP, GA, JSP, PSE & SIF, 2016, Copenhagen

Type: Conference abstract in journal (Peer reviewed)

Status: Published     |    Year: 2016     |    DOI: http://dx.doi.org/10.1055/s-0036-1596147

2015
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antiSMASH 3.0—a comprehensive resource for the genome mining of biosynthetic gene clusters

Weber, Tilmann ; Blin, Kai ; Duddela, Srikanth ; Krug, Daniel ; Kim, Hyun Uk ; Bruccoleri, Robert ; Lee, Sang Yup ; Fischbach, Michael A. ; Müller, Rolf ; Wohlleben, Wolfgang
in journal: Nucleic Acids Research (ISSN: 0305-1048) (DOI: http://dx.doi.org/10.1093/nar/gkv437), vol: 43, issue: W1, pages: W237-W243, 2015

Type: Journal article (Peer reviewed)

Status: Published     |    Year: 2015     |    DOI: http://dx.doi.org/10.1093/nar/gkv437


http://www.biosustain.dtu.dk/english/publications/person?id=101881&tab=2&qt=dtupublicationquery
23 SEPTEMBER 2017