Publications

Publications

Publikationer rss feed

2017
 

Three-dimensional Hierarchical Metal oxide-Carbon Electrode Material for High Efficient Microbial Electrosynthesis

Cui, Mengmeng ; Nie, Huarong ; Zhang, Tian ; Lovley, Derek R. ; Russell, Thomas P.
in journal: Sustainable Energy & Fuels (ISSN: 2398-4902) (DOI: http://dx.doi.org/10.1039/C7SE00073A), vol: 1, pages: 1171-1176, 2017

Type: Journal article (Peer reviewed)

Status: Published     |    Year: 2017     |    DOI: http://dx.doi.org/10.1039/C7SE00073A

 

Increased production of L-serine in Escherichia coli through Adaptive Laboratory Evolution

Mundhada, Hemanshu ; Seoane, Jose Miguel ; Schneider, Konstantin ; Christensen, Hanne Bjerre ; Koza, Anna ; Herrgard, Markus ; Feist, Adam ; Nielsen, Alex Toftgaard
in journal: Metabolic Engineering (ISSN: 1096-7176) (DOI: http://dx.doi.org/10.1016/j.ymben.2016.11.008), vol: 39, pages: 141–150, 2017

Type: Journal article (Peer reviewed)

Status: Published     |    Year: 2017     |    DOI: http://dx.doi.org/10.1016/j.ymben.2016.11.008

 

Production of organics from CO2 by microbial electrosynthesis (MES) at high temperature

Faraghi Parapari, Neda ; Zengler, Karsten
in journal: Journal of Chemical Technology and Biotechnology (ISSN: 0268-2575) (DOI: http://dx.doi.org/10.1002/jctb.5015), vol: 92, issue: 2, pages: 375–381, 2017

Type: Journal article (Peer reviewed)

Status: Published     |    Year: 2017     |    DOI: http://dx.doi.org/10.1002/jctb.5015

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Whole-Genome Sequencing of Invasion-Resistant Cells Identifies Laminin α2 as a Host Factor for Bacterial Invasion

van Wijk, Xander M. ; Döhrmann, Simon ; Hallstrom, Bjorn ; Li, Shangzhong ; Voldborg, Bjørn Gunnar ; Meng, Brandon X. ; McKee, Karen K. ; van Kuppevelt, Toin H. ; Yurchenco, Peter D. ; Palsson, Bernhard ; Lewis, Nathan ; Nizet, Victor ; Esko, Jeffrey D.
in journal: mBio (ISSN: 2161-2129) (DOI: http://dx.doi.org/10.1128/mBio.02128-16), vol: 8, issue: 1, 2017

Type: Journal article (Peer reviewed)

Status: Published     |    Year: 2017     |    DOI: http://dx.doi.org/10.1128/mBio.02128-16

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Ribosome profiling-guided depletion of an mRNA increases cell growth rate and protein secretion

Beuchert Kallehauge, Thomas ; Li, Shangzhong ; Pedersen, Lasse Ebdrup ; Kwang Ha, Tae ; Ley, Daniel ; Andersen, Mikael Rørdam ; Kildegaard, Helene Faustrup ; Min Lee, Gyun ; Lewis, Nathan E.
in journal: Scientific Reports (ISSN: 2045-2322) (DOI: http://dx.doi.org/10.1038/srep40388), vol: 7, 2017

Type: Journal article (Peer reviewed)

Status: Published     |    Year: 2017     |    DOI: http://dx.doi.org/10.1038/srep40388

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Furios: a web-based tool for identification of Vibrionaceae species using the fur gene

Machado, Henrique ; Cardoso, Joao ; Giubergia, Sonia ; Rapacki, Kristoffer ; Gram, Lone
in journal: BMC Microbiology (ISSN: 1471-2180) (DOI: http://dx.doi.org/10.3389/fmicb.2017.00414), vol: 8, 2017

Type: Journal article (Peer reviewed)

Status: Published     |    Year: 2017     |    DOI: http://dx.doi.org/10.3389/fmicb.2017.00414

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Comparative Genomics Reveals High Genomic Diversity in the Genus Photobacterium

Machado, Henrique ; Gram, Lone
in journal: Frontiers in Microbiology (ISSN: 1664-302X) (DOI: http://dx.doi.org/10.3389/fmicb.2017.01204), vol: 8, 2017

Type: Journal article (Peer reviewed)

Status: Published     |    Year: 2017     |    DOI: http://dx.doi.org/10.3389/fmicb.2017.01204

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Biobased production of alkanes and alkenes through metabolic engineering of microorganisms

Kang, Min Kyoung ; Nielsen, Jens
in journal: Journal of Industrial Microbiology and Biotechnology (ISSN: 1367-5435) (DOI: http://dx.doi.org/10.1007/s10295-016-1814-y), vol: 44, issue: 4, pages: 613-622, 2017

Type: Review (Peer reviewed)

Status: Published     |    Year: 2017     |    DOI: http://dx.doi.org/10.1007/s10295-016-1814-y

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The antiSMASH database, a comprehensive database of microbial secondary metabolite biosynthetic gene clusters

Blin, Kai ; Medema, Marnix H. ; Kottmann, Renzo ; Lee, Sang Yup ; Weber, Tilmann
in journal: Nucleic Acids Research (ISSN: 0305-1048) (DOI: http://dx.doi.org/10.1093/nar/gkw960), vol: 45, issue: D1, pages: D555-D559, 2017

Type: Journal article (Peer reviewed)

Status: Published     |    Year: 2017     |    DOI: http://dx.doi.org/10.1093/nar/gkw960

 

An expression tag toolbox for microbial production of membrane bound plant cytochromes P450

Vazquez Albacete, Dario ; Cavaleiro, Mafalda ; Christensen, Ulla ; Seppala, Susanna ; Møller, Birger Lindberg ; Nørholm, Morten
in journal: Biotechnology and Bioengineering (ISSN: 0006-3592) (DOI: http://dx.doi.org/10.1002/bit.26203), vol: 114, issue: 4, pages: 751-760, 2017

Type: Journal article (Peer reviewed)

Status: Published     |    Year: 2017     |    DOI: http://dx.doi.org/10.1002/bit.26203

 

Evolutionary engineering reveals divergent paths when yeast is adapted to different acidic environments

Fletcher, Eugene ; Feizi, Amir ; Bisschops, Markus M. M. ; Hallström, Björn M. ; Khoomrung, Sakda ; Siewers, Verena ; Nielsen, Jens
in journal: Metabolic Engineering (ISSN: 1096-7176) (DOI: http://dx.doi.org/10.1016/j.ymben.2016.10.010), vol: 39, pages: 19–28, 2017

Type: Journal article (Peer reviewed)

Status: Published     |    Year: 2017     |    DOI: http://dx.doi.org/10.1016/j.ymben.2016.10.010

 

Global transcriptional response of solvent-sensitive and solvent-tolerant Pseudomonas putida strains exposed to toluene

Molina-Santiago, Carlos ; Udaondo, Zulema ; Gómez Lozano, María ; Molin, Søren ; Ramos, Juan-Luis
in journal: Environmental Microbiology (ISSN: 1462-2912) (DOI: http://dx.doi.org/10.1111/1462-2920.13585), vol: 19, issue: 2, 2017

Type: Journal article (Peer reviewed)

Status: Published     |    Year: 2017     |    DOI: http://dx.doi.org/10.1111/1462-2920.13585

 

Extracellular Electron Uptake: Among Autotrophs and Mediated by Surfaces

Tremblay, Pier-Luc ; Angenent, Largus T. ; Zhang, Tian
in journal: Trends in Biotechnology (ISSN: 0167-7799) (DOI: http://dx.doi.org/10.1016/j.tibtech.2016.10.004), vol: 35, issue: 4, pages: 360-371, 2017

Type: Journal article (Peer reviewed)

Status: Published     |    Year: 2017     |    DOI: http://dx.doi.org/10.1016/j.tibtech.2016.10.004

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Detection of p-coumaric acid from cell supernatant using surface enhanced Raman scattering

Morelli, Lidia ; Jendresen, Christian Bille ; Zor, Kinga ; Rindzevicius, Tomas ; Schmidt, Michael Stenbæk ; Nielsen, Alex Toftgaard ; Boisen, Anja
in journal: Procedia Technology (ISSN: 2212-0173) (DOI: http://dx.doi.org/ 10.1016/j.protcy.2017.04.081), vol: 27, pages: 190-192, 2017
Presented at:
Biosensors 2016, 2016, Gothenburg

Type: Conference abstract in journal (Peer reviewed)

Status: Published     |    Year: 2017     |    DOI: http://dx.doi.org/ 10.1016/j.protcy.2017.04.081

 

Predictive glycoengineering of biosimilars using a Markov chain glycosylation model

Spahn, Philipp N. ; Hansen, Anders Holmgaard ; Kol, Stefan ; Voldborg, Bjørn Gunnar ; Lewis, Nathan E.
in journal: Biotechnology Journal (ISSN: 1860-6768) (DOI: http://dx.doi.org/10.1002/biot.201600489), vol: 12, issue: 2, 2017

Type: Journal article (Peer reviewed)

Status: Published     |    Year: 2017     |    DOI: http://dx.doi.org/10.1002/biot.201600489

 

Droplet size influences division of mammalian cell factories in droplet microfluidic cultivation

Periyannan Rajeswari, Prem Kumar ; Joensson, Haakan N. ; Svahn, Helene Andersson
in journal: Electrophoresis (ISSN: 0173-0835) (DOI: http://dx.doi.org/10.1002/elps.201600316), vol: 38, issue: 2, pages: 305–310, 2017

Type: Journal article (Peer reviewed)

Status: Published     |    Year: 2017     |    DOI: http://dx.doi.org/10.1002/elps.201600316

 

Affibody scaffolds improve sesquiterpene production in Saccharomyces cerevisiae

Tippmann, Stefan ; Anfelt, Josefine ; David, Florian ; Rand, Jacqueline M. ; Siewers, Verena ; Uhlén, Mathias ; Nielsen, Jens ; Hudson, Elton Paul
in journal: A C S Synthetic Biology (ISSN: 2161-5063) (DOI: http://dx.doi.org/10.1021/acssynbio.6b00109), vol: 6, issue: 1, pages: 19-28, 2017

Type: Letter (Peer reviewed)

Status: Published     |    Year: 2017     |    DOI: http://dx.doi.org/10.1021/acssynbio.6b00109

 

Engineer medium and feed for modulating N-glycosylation of recombinant protein production in CHO cell culture

Fan, Yuzhou ; Kildegaard, Helene Faustrup ; Andersen, Mikael Rørdam
part of: Heterologous Protein Production in CHO cells, pages: 209-226, 2016, Springer,

Type: Book chapter (Peer reviewed)

Status: Published     |    Year: 2017     |    DOI: http://dx.doi.org/10.1007/978-1-4939-6972-2_14

 

Optimization of autohydrolysis conditions to extract antioxidant phenolic compounds from spent coffee grounds

Ballesteros, Lina F. ; Ramirez, Monica J. ; Orrego, Carlos E. ; Teixeira, Jose A. ; Mussatto, Solange I.
in journal: Journal of Food Engineering (ISSN: 0260-8774) (DOI: http://dx.doi.org/10.1016/j.jfoodeng.2016.11.014), vol: 199, pages: 1-8, 2017

Type: Journal article (Peer reviewed)

Status: Published     |    Year: 2017     |    DOI: http://dx.doi.org/10.1016/j.jfoodeng.2016.11.014

 

The aldehyde dehydrogenase, AldA, is essential for L-1,2-propanediol utilization in laboratory-evolved Escherichia coli

Aziz, Ramy K. ; Monk, Jonathan M. ; Andrews, Kathleen A. ; Nhan, Jenny ; Khaw, Valerie L. ; Wong, Hesper ; Palsson, Bernhard ; Charusanti, Pep
in journal: Microbiological Research (ISSN: 0944-5013) (DOI: http://dx.doi.org/10.1016/j.micres.2016.10.006), vol: 194, pages: 47-52, 2017

Type: Journal article (Peer reviewed)

Status: Published     |    Year: 2017     |    DOI: http://dx.doi.org/10.1016/j.micres.2016.10.006

 

Improving the secretory capacity of Chinese hamster ovary cells by ectopic expression of effector genes: Lessons learned and future directions

Hansen, Henning Gram ; Pristovsek, Nusa ; Kildegaard, Helene Faustrup ; Min Lee, Gyun
in journal: Biotechnology Advances (ISSN: 0734-9750) (DOI: http://dx.doi.org/10.1016/j.biotechadv.2016.11.008), vol: 35, issue: 1, pages: 64–76, 2017

Type: Journal article (Peer reviewed)

Status: Published     |    Year: 2017     |    DOI: http://dx.doi.org/10.1016/j.biotechadv.2016.11.008

 

Deciphering flux adjustments of engineered E. coli cells during fermentation with changing growth conditions

He, Lian ; Xiu, Yu ; Jones, J. Andrew ; Baidoo, Edward E. K. ; Keasling, Jay ; Tang, Yinjie J ; Koffas, Mattheos A. G.
in journal: Metabolic Engineering (ISSN: 1096-7176) (DOI: http://dx.doi.org/10.1016/j.ymben.2016.12.008), vol: 39, pages: 247–256, 2017

Type: Journal article (Peer reviewed)

Status: Published     |    Year: 2017     |    DOI: http://dx.doi.org/10.1016/j.ymben.2016.12.008

 

Literature mining supports a next-generation modeling approach to predict cellular byproduct secretion

King, Zachary A. ; O'Brien, Edward J. ; Feist, Adam ; Palsson, Bernhard
in journal: Metabolic Engineering (ISSN: 1096-7176) (DOI: http://dx.doi.org/10.1016/j.ymben.2016.12.004), vol: 39, pages: 220–227, 2017

Type: Journal article (Peer reviewed)

Status: Published     |    Year: 2017     |    DOI: http://dx.doi.org/10.1016/j.ymben.2016.12.004

 

Establishing very long-chain fatty alcohol and wax ester biosynthesis in Saccharomyces cerevisiae

Wenning, Leonie ; Yu, Tao ; David, Florian ; Nielsen, Jens ; Siewers, Verena
in journal: Biotechnology and Bioengineering (ISSN: 0006-3592) (DOI: http://dx.doi.org/10.1002/bit.26220), vol: 114, issue: 5, pages: 1025-1035, 2017

Type: Journal article (Peer reviewed)

Status: Published     |    Year: 2017     |    DOI: http://dx.doi.org/10.1002/bit.26220

 

Hyaluronidase-inhibitory activities of glycosaminoglycans from Liparis tessellatus eggs

Ticar, Bernadeth F. ; Rohmah, Zuliyati ; Mussatto, Solange I. ; Lim, Jae-Min ; Park, Seongha ; Choi, Byeong-Dae
in journal: Carbohydrate Polymers (ISSN: 0144-8617) (DOI: http://dx.doi.org/10.1016/j.carbpol.2016.12.065), vol: 161, pages: 15-20, 2017

Type: Journal article (Peer reviewed)

Status: Published     |    Year: 2017     |    DOI: http://dx.doi.org/10.1016/j.carbpol.2016.12.065